1,254 Consensus binding sites for Homo sapiens Gene "ARF5" with filters: tRF Type∈{tRF-1 / tsRNA,tRF-3,tRF-5,5'U tRF,i-tRF,5' tRH / tiR,3' tRH / tiR}; tRF Source∈{tRFdb,tsRNA study,tsRFun,tsRBase}; Binding Region∈{3' UTR,CDS,5' UTR,/}; Free Energy≤-10.0; MCL≥6; Evidence Only False
| tRF ID | Standardized tRF ID | RNA ID | RNA Name | Gene ID | Gene Name | Interaction Illustration | Free Energy -46-10 -46 -10 | Maximum Complementary Length 621 6 21 | Prediction Tool | tRF Type | tRF Source | RNA Type | Binding Region | Gene-level Evidence
| Site-level Evidence
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| hsa_tsr003995 | tDR-59:76-Pro-AGG-1-M8 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 212 225 546
| | | |
5'-GCC...GAAGU AGA ACCAC...ACG-3'
target UGGGGG UUGUC
|||||| |:|||
tRF 3'-ACCCCC AGCAG
G GCCCUA-5'
| | |
18 7 1 | -23.7 | 6 | RNAhybrid | tRF-3 | tsRBase | protein_coding | CDS | ||
| hsa_tsr003995 | tDR-59:76-Pro-AGG-1-M8 | ENST00000000233 | ARF5-201 | ENSG00000004059 | ARF5 | 1 858 869 1032
| | | |
5'-CUG...UGGAA U CCAAG...GUA-3'
target GGGGCU UCC GG
|||||| ||| ||
tRF CCCCGA AGG CC
3'-AC GC C UA-5'
| | |
16 3 1 | -23.1 | 6 | RNAhybrid | tRF-3 | tsRBase | protein_coding | 3' UTR | ||
| hsa_tsr003995 | tDR-59:76-Pro-AGG-1-M8 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 368 389 546
| | | |
5'-GCC...CUUUG U ACA AAUGA GCGGG...ACG-3'
target UGG GG GU CCGGGA
||| || || ||||||
tRF 3'-ACC CC CA GGCCCU
C GAG A-5'
| |
18 2 | -22.7 | 6 | RNAhybrid | tRF-3 | tsRBase | protein_coding | CDS | ||
| hsa_tsr004910 | tDR-26:54-Cys-GCA-2-M9 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 349 374 546
| | | |
5'-GCC...AGAAC CA AUC G CAGUA...ACG-3'
target ACU GGGCCUC UUUGUGGU GA
||: ||:|||| |:||::|| :|
tRF 3'-UGG CCUGGAG AGACGUCA UU
CC AACU G UA-5'
| | |
29 3 1 | -27.5 | 8 | RNAhybrid | i-tRF | tsRBase | protein_coding | CDS | ||
| hsa_tsr006295 | tDR-25:54-Cys-GCA-2-M9 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 349 374 546
| | | |
5'-GCC...AGAAC CA AUC G CAGUA...ACG-3'
target ACU GGGCCUC UUUGUGGU GA
||: ||:|||| |:||::|| :|
tRF 3'-UGG CCUGGAG AGACGUCA UU
CC AACU G UAC-5'
| | |
30 4 1 | -27.5 | 8 | RNAhybrid | i-tRF | tsRBase | protein_coding | CDS | ||
| hsa_tsr010699 | tDR-7:31-Gly-CCC-2 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 471 490 546
| | | |
5'-GCC...AACAA G CA A UGCCC...ACG-3'
target GCA GA UGCC C ACGCCA
||| || |:|| | ||:|||
tRF CGU CU AUGG G UGUGGU
3'-AGAA A U A C-5'
| | |
24 20 2 | -23.3 | 6 | RNAhybrid | i-tRF | tsRBase | protein_coding | CDS | ||
| hsa_tsr012662 | tDR-1:29-Gly-CCC-3 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 399 420 546
| | | |
5'-GCC...GUCCA GA AAGAU...ACG-3'
target AGAA UCUGCU UGAACU CCAG
|||| |||:|: |||||: |||:
tRF UCUU AGAUGG ACUUGG GGUU
3'-C A UA U ACG-5'
| | |
27 4 1 | -25.7 | 6 | RNAhybrid | tRF-5 | tsRBase | protein_coding | CDS | ||
| hsa_tsr012662 | tDR-1:29-Gly-CCC-3 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 399 419 546
| | | |
5'-GCC...GUCCA A GAAGA...ACG-3'
target AGAAU CUGCUG UGAACU CCA
||||| ||:|:: |||||: |||
tRF UCUUA GAUGGU ACUUGG GGU
3'-C A A U UACG-5'
| | |
27 5 1 | -10.21 | 6 | IntaRNA | tRF-5 | tsRBase | protein_coding | CDS | ||
| hsa_tsr012682 | tDR-1:29-Gly-CCC-1-M4 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 399 420 546
| | | |
5'-GCC...GUCCA GA AAGAU...ACG-3'
target AGAA UCUGCU UGAACU CCAG
|||| |||:|: |||||: |||:
tRF UCUU AGAUGG ACUUGG GGUU
3'-C A UG U ACG-5'
| | |
27 4 1 | -25.7 | 6 | RNAhybrid | tRF-5 | tsRBase | protein_coding | CDS | ||
| hsa_tsr012682 | tDR-1:29-Gly-CCC-1-M4 | ENST00000415666 | ARF5-202 | ENSG00000004059 | ARF5 | 1 399 419 546
| | | |
5'-GCC...GUCCA GA GAAGA...ACG-3'
target AGAAU CUGCU UGAACU CCA
||||| ||:|: |||||: |||
tRF UCUUA GAUGG ACUUGG GGU
3'-C A UG U UACG-5'
| | |
27 5 1 | -10.91 | 6 | IntaRNA | tRF-5 | tsRBase | protein_coding | CDS |
